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module-toolkit
Multi-agent AI pipeline that turns any bioinformatics CLI tool into a production-ready GenePattern module.
1stars
3forks
Python
ai-agentsbioinformaticscli-toolscode-generationgenepatterngenomicsllmmodule-generationmulti-agentpydantic-aipythonreproducible-research
Quality signals
ActiveNo testsNo CIThin docsNo licenseNew
InstallSKILLInstall as a Claude Code skill
Universal installANY TOOL
$ npx skillcity@latest genepattern/module-toolkitAuto-detects the skill or MCP server in this repo and installs it for Claude Code, Codex, Cursor, Cline, OpenCode, Gemini CLI, Anti-Gravity, OpenClaw and Hermes.
Requires Node.js 18+ (ships with npx).
Or install manually
# Install into ~/.claude/skills/ mkdir -p ~/.claude/skills/module-toolkit curl -fsSL https://raw.githubusercontent.com/genepattern/module-toolkit/main/SKILL.md -o ~/.claude/skills/module-toolkit/SKILL.md
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Ask a simulated agent to run this skill. It loads the real SKILL.md and reasons over your task with NVIDIA.
module-toolkit — sandboxAI sandbox
Pick a quick prompt below or type your own — watch the agent execute this skill step by step.
guest@skillcity:~$Try a prompt